BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H04LP1|AL426278
(808 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1755 1599 0.0
>3x_Contig1755
Length = 22936
Score = 1599 bits (806), Expect = 0.0
Identities = 807/808 (99%)
Strand = Plus / Plus
Query: 1 aagcttgagaaaaagaaagatcccgggtaacacccttgacttagatgaaagtttaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17370 aagcttgagaaaaagaaagatcccgggtaacacccttgacttagatgaaagtttaccagg 17429
Query: 61 ctttctgcgaaccgtagcagcaagattagcttctgctggaggtatctggtttagagtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17430 ctttctgcgaaccgtagcagcaagattagcttctgctggaggtatctggtttagagtgtg 17489
Query: 121 aaaaatacacgccatttaccagtacaaaggcaattcactgtctttcagtaatctaatcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17490 aaaaatacacgccatttaccagtacaaaggcaattcactgtctttcagtaatctaatcgg 17549
Query: 181 tagcaaatgtttggatgttgttttgttggaactgcaaatccaaaacgccaattgatttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17550 tagcaaatgtttggatgttgttttgttggaactgcaaatccaaaacgccaattgatttac 17609
Query: 241 acttagagttctgatcttaggttttgtactcctcctccgtataattcagtagacttttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17610 acttagagttctgatcttaggttttgtactcctcctccgtataattcagtagacttttta 17669
Query: 301 accgtgaactggtatcgctatacatcggcacaaatttctacattcgacctgcaggctgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17670 accgtgaactggtatcgctatacatcggcacaaatttctacattcgacctgcaggctgtg 17729
Query: 361 aaatcaggcagaattaacttaacaactccattttttgtttgccccatgaatgatgaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17730 aaatcaggcagaattaacttaacaactccattttttgtttgccccatgaatgatgaaagt 17789
Query: 421 tttctaaaaaaacctgttatccctagggcgcggtacactaaacattcttaagtgttgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17790 tttctaaaaaaacctgttatccctagggcgcggtacactaaacattcttaagtgttgttc 17849
Query: 481 aatcaaaacaatacatcgatgtacattctgtagtttaccgtaaattctaacttcttgagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17850 aatcaaaacaatacatcgatgtacattctgtagtttaccgtaaattctaacttcttgagt 17909
Query: 541 tgtatttcgggggtttttgagatcgaaattgcttaaccttttctcaattggcataatctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17910 tgtatttcgggggtttttgagatcgaaattgcttaaccttttctcaattggcataatctt 17969
Query: 601 tatattgacacctgcttcacttctgagaaattcaatcctctgaccttcatgccctatgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17970 tatattgacacctgcttcacttctgagaaattcaatcctctgaccttcatgccctatgag 18029
Query: 661 gtagcttacttgcaaacgactcaagaccaaactttcctcggtgggagtyacattctcagc 720
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 18030 gtagcttacttgcaaacgactcaagaccaaactttcctcggtgggagtcacattctcagc 18089
Query: 721 ttctgtttcaatctggaaaatattatcagttttaccaggaatgcaactttcaaaaacatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18090 ttctgtttcaatctggaaaatattatcagttttaccaggaatgcaactttcaaaaacatt 18149
Query: 781 ggtattgttggaatacaagtccttgttc 808
||||||||||||||||||||||||||||
Sbjct: 18150 ggtattgttggaatacaagtccttgttc 18177
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6402
Number of Sequences: 1807
Number of extensions: 6402
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 808
length of database: 10,358,551
effective HSP length: 16
effective length of query: 792
effective length of database: 10,329,639
effective search space: 8181074088
effective search space used: 8181074088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)